University of Iowa, Carver College of Medicine

University of Iowa, Department of Physiology and Biophysics

CPAS - Computational Proteomics Analysis System

Seattle Proteome Center (SPC) - Proteomics Tools

Selected Publications:

Lundgren DH, Martinez HD, Wright ME, Han DK, Protein identification using Sorcerer 2 and SEQUEST. Curr Protoc Bioinformatics, 2009. Abstract

Harryl D. Martinez, Rohini J. Jasavala, Izumi Hinkson, Latricia D. Fitzerald, James S. Trimmer, Hsing-Jien Kung and Michael E. Wright, RNA Editing of Androgen Receptor Gene Transcripts in Prostate Cancer Cells. Journal Biological Chemistry, 2008. Abstract.

Rohini Jasavala, Harryl D. Martinez, Jaykumar Thumar, Armann Andaya, Anne-Claude Gingras, Jimmy K. Eng, Ruedi Aebersold, David K. Han, and Michael E. Wright, Identification of putative androgen receptor interaction protein modules: Cytoskeleton and endosomes modulate AR signaling in prostate cancer cells. Mol Cell Proteomics, 2006. Abstract.

S-I Hwang, J Thumar, D H Lundgren, K Rezaul, V Mayya, L Wu, J Eng, M E Wright, and D K Han, Direct cancer tissue proteomics: a method to identify candidate cancer biomarkers from formalin-fixed paraffin-embedded archival tissues. Oncogene, 2006. Abstract.

Harryl D. Martinez, Armann A Andaya, Rohini J. Jasavala, David K. Han, and Michael E. Wright, A Mass Spectrometry Based Platform for Biomarker Discovery in Archived Prostate Tissues. ASMS Poster, 2006. Abstract.

Rohini J Jasavala, Armann A Andaya, Harryl Martinez, Anne-Claude Gringas, David K. Han, and Michael E Wright, Elucidating Androgen Receptor Interacting Protein Networks using Quantitative Mass Spectrometry. ASMS Poster, 2006. Abstract.

Wright, M.E., D.K. Han, and R. Aebersold, Mass spectrometry based expression profiling of clinical prostate cancer. Mol Cell Proteomics, 2005. Abstract.

Desiere, F., et al., Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry. Genome Biol, 2005. 6(1): p. R9. Abstract.

Martin, D.B., et al., Quantitative proteomic analysis of proteins released by neoplastic prostate epithelium. Cancer Res, 2004. 64(1): p. 347-55. Abstract.

Lundgren, D.H., et al., PROTEOME-3D: An Interactive Bioinformatics Tool for Large-Scale Data Exploration and Knowledge Discovery. Mol Cell Proteomics, 2003. 2(11): p. 1164-76. Abstract.

Griffin, T.J., et al., Abundance ratio-dependent proteomic analysis by mass spectrometry. Anal Chem, 2003. 75(4): p. 867-74. Abstarct.

Wright, M.E., M.J. Tsai, and R. Aebersold, Androgen receptor represses the neuroendocrine transdifferentiation process in prostate cancer cells. Mol Endocrinol, 2003. 17(9): p. 1726-37. Abstract.

Wright, M.E., et al., Identification of androgen-coregulated protein networks from the microsomes of human prostate cancer cells. Genome Biol, 2003. 5(1): p. R4. Abstract.